Data from: Polyamines in the life of Arabidopsis: profiling the expression of S-adenosylmethionine decarboxylase (SAMDC) gene family during its life cycle
Data files
Nov 16, 2018 version files 66.88 KB
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SAMDC 3'UTR.fas
1.20 KB
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SAMDC 3'UTR.mas
2.89 KB
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SAMDC 3'UTRMeg.meg
2.69 KB
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SAMDC 5'UTR Orthologues MEG.meg
21.24 KB
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SAMDC 5'UTR Orthologues.fas
7.62 KB
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SAMDC 5'UTR.fas
3.04 KB
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SAMDC 5'UTRMeg.meg
6.37 KB
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SAMDC1Vs2GATA.txt
1.43 KB
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SAMDC1Vs3.rtf - Copy.kaks
627 B
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SAMDC1Vs3.txt
1.42 KB
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SAMDC1Vs4.rtf - Copy.kaks
617 B
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SAMDC1Vs4.txt
1.42 KB
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SAMDC2Vs4.rtf - Copy.kaks
630 B
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SAMDC3'UTRnwk.nwk
98 B
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SAMDC3'UTRorignwk.nwk
186 B
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SAMDC3Vs4.txt
1.43 KB
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SAMDC3Vs5genes.rtf - Copy.kaks
615 B
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SAMDC5'UTRnwk.nwk
98 B
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SAMDC5'UTRorignwk.nwk
186 B
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SAMDCGATA.txt
2.85 KB
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SAMDCGATAREF.txt
711 B
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SAMDCgenes 1Vs2.rtf - Copy.kaks
631 B
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SAMDCpromoters align MEG.meg
5.30 KB
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SAMDCpromoters align.fas
3.59 KB
Abstract
Arabidopsis has 5 paralogs of the S-adenosylmethionine decarboxylase (SAMDC) gene. Neither their specific role in development nor the role of positive/purifying selection in genetic divergence of this gene family is known. While some data are available on the organ-specific expression of AtSAMDC1, AtSAMDC2, AtSAMDC3 and AtSAMDC4 at transcript level, not much is known about their promoters including AtSAMDC5 (another paralog), which is believed to be non-functional.