Data from: The evolution of heat shock protein sequences, cis-regulatory elements, and expression profiles in the eusocial Hymenoptera

Nguyen AD, Gotelli NJ, Helms Cahan S

Date Published: February 10, 2016

DOI: http://dx.doi.org/10.5061/dryad.8vj6j

 

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Title 20151211_hsc70-4_mrbayes
Downloaded 5 times
Description This file is a phylogenetic bayesian analysis with MrBayes for 17 insect species of hsc70-4
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Title 20151211_hsp40_mrbayes
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Description This file is a phylogenetic bayesian analysis of hsp40 with MrBayes for 17 species.
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Title 20151211_hsp83_mrbayes
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Description This file is a phylogenetic bayesian analysis of hsp83 with MrBayes for 17 species.
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Title 20151211_insect_BIP_hsc70-3_cis-reg_alignment
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Description This file is a local alignment of the promoter region of hsc70-3 for 17 insect species used to screen for evolutionary conserved cis-regulatory heat shock elements.
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Title 20151211_insect_hsc70-4_cis-reg_alignment
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Description This file is a local alignment of the promoter region of hsc70-4 for 17 insect species used to screen for evolutionary conserved cis-regulatory heat shock elements.
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Title 20151211_insect_hsp40_cis-reg_alignment
Downloaded 5 times
Description This file is a local alignment of the promoter region of hsc40 for 17 insect species used to screen for evolutionary conserved cis-regulatory heat shock elements.
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Title 20151211_insect_hsc70-5_cis-reg_alignment
Downloaded 2 times
Description This file is a local alignment of the promoter region of hsc70-5 for 17 insect species used to screen for evolutionary conserved cis-regulatory heat shock elements.
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Title 20151211_insect_hsp60_cis-reg_alignment
Downloaded 3 times
Description This file is a local alignment of the promoter region of hsp60 for 17 insect species used to screen for evolutionary conserved cis-regulatory heat shock elements.
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Title 20151211_insect_hsp83_cis-reg_alignment
Downloaded 5 times
Description This file is a local alignment of the promoter region of hsc83 for 17 insect species used to screen for evolutionary conserved cis-regulatory heat shock elements.
Download 20151211_insect_hsp83_cis-reg_alignment.fasta (11.71 Kb)
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Title 20151211_insect_BIP_hsc70-3_tree_alignment
Downloaded 3 times
Description This is a nexus file with an amino acid alignment and maximum likelihood(PhyML) phylogenetic reconstruction of hsc70-3 for 17 insect species.
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Title 20151211_insect_hsc70-4_tree_alignment
Downloaded 9 times
Description This is a nexus file with an amino acid alignment and maximum likelihood(PhyML) phylogenetic reconstruction of hsc70-4 for 17 insect species.
Download 20151211_insect_BIP_hsc70-4_tree_alignment.nex (574.4 Kb)
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Title 20151211_insect_hsp83_tree_alignment
Downloaded 16 times
Description This is a nexus file with an amino acid alignment and maximum likelihood(PhyML) phylogenetic reconstruction of hsp83 for 17 insect species.
Download 20151211_insect_hsp83_tree_alignment.nex (920.9 Kb)
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Title 20151211_insect_hsc70-5_tree_alignment
Downloaded 2 times
Description This is a nexus file with an amino acid alignment and maximum likelihood(PhyML) phylogenetic reconstruction of hsc70-5 for 17 insect species.
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Title 20151211_insect_hsp40_tree_alignment
Downloaded 1 time
Description This is a nexus file with an amino acid alignment and maximum likelihood(PhyML) phylogenetic reconstruction of hsp40 for 17 insect species.
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Title 20151211_insect_hsp60_tree_alignment
Downloaded 4 times
Description This is a nexus file with an amino acid alignment and maximum likelihood(PhyML) phylogenetic reconstruction of hsp60 for 17 insect species.
Download 20151211_insect_hsp60_tree_alignment.nex (69.14 Kb)
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When using this data, please cite the original publication:

Nguyen AD, Gotelli NJ, Helms Cahan S (2016) The evolution of heat shock protein sequences, cis-regulatory elements, and expression profiles in the eusocial Hymenoptera. BMC Evolutionary Biology 16: 15. http://dx.doi.org/10.1186/s12862-015-0573-0

Additionally, please cite the Dryad data package:

Nguyen AD, Gotelli NJ, Helms Cahan S (2016) Data from: The evolution of heat shock protein sequences, cis-regulatory elements, and expression profiles in the eusocial Hymenoptera. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.8vj6j
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