Data from: Selection, periodicity and potential function for highly iterative Palindrome-1 (HIP1) in cyanobacterial genomes

Xu M, Lawrence JG, Durand D

Date Published: February 10, 2018

DOI: https://doi.org/10.5061/dryad.b301d

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Title Synechococcus elongatus PCC 7942 transcript data derived from Vijayan et al. (2011)
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Download syf-transcript-info.zip (59.08 Kb)
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Title Parameters estimated from sine wave fitting for HIP1 and control hexamers
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Download HIP1_periodicity_parameters.zip (128.7 Mb)
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Title The genuine and randomized genomic coordinates for HIP1-like motifs
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Description The genuine and randomized genomic coordinates for HIP1-like motifs, for all the 50 genomes in our study
Download HIP1_from_50_HIP1_rich_genomes.zip (259.9 Mb)
Download README.txt (1.167 Kb)
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Title The genuine and randomized genomic coordinates for control motifs - Part 1
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Description The genuine and randomized genomic coordinates for control motifs, for genomes with names that begin with A to N.
Download Ctrl_from_50_HIP1_rich_genomes_Part1.zip (633.2 Mb)
Download README.txt (1.513 Kb)
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Title The genuine and randomized genomic coordinates for control motifs - Part 2
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Description The genuine and randomized genomic coordinates for control motifs, for genomes with names that begin with O to Z.
Download Ctrl_from_50_HIP1_rich_genomes_Part2.zip (535.0 Mb)
Download README.txt (1.819 Kb)
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When using this data, please cite the original publication:

Xu M, Lawrence JG, Durand D (2018) Selection, periodicity and potential function for Highly Iterative Palindrome-1 (HIP1) in cyanobacterial genomes. Nucleic Acids Research 46(5): 2265-2278. https://doi.org/10.1093/nar/gky075

Additionally, please cite the Dryad data package:

Xu M, Lawrence JG, Durand D (2018) Data from: Selection, periodicity and potential function for highly iterative Palindrome-1 (HIP1) in cyanobacterial genomes. Dryad Digital Repository. https://doi.org/10.5061/dryad.b301d
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