Data from: Discovery of metabolic biomarkers for Duchenne Muscular Dystrophy within a natural history study

Boca SM, Nishida M, Harris M, Rao S, Cheema AK, Gill K, Seol H, Morgenroth LP, Henricson E, McDonald C, Mah JK, Clemens PR, Hoffman EP, Hathout Y, Madhavan S

Date Published: April 20, 2016

DOI: http://dx.doi.org/10.5061/dryad.qg6q2

 

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Title Raw CDF files, sample information, code to process them
Downloaded 14 times
Description This is a zipped directory. Once unzipped, it has the following directory structure: Neg (directory), Pos (directory), DMD_Metabolomics_samples_files.csv, process_data.R . The Neg and Pos directories each have a DMD directory and a Normal directory, along with the files Annodiffre_neg.RData and Annodiffre_pos.RData, respectively, which are generated by running the code in process_data.R . The files in the DMD and Normal directories are raw CDF files consisting of the samples from DMD patients and from healthy (normal) controls, respectively. The Neg and Pos directories correspond to the negative, respectively, positive modes. The sample information is given in the DMD_Metabolomics_samples_files.csv file.
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When using this data, please cite the original publication:

Boca SM, Nishida M, Harris M, Rao S, Cheema AK, Gill K, Seol H, Morgenroth LP, Henricson E, McDonald C, Mah JK, Clemens PR, Hoffman EP, Hathout Y, Madhavan S (2016) Discovery of metabolic biomarkers for Duchenne Muscular Dystrophy within a natural history study. PLOS ONE 11(4): e0153461. http://dx.doi.org/10.1371/journal.pone.0153461

Additionally, please cite the Dryad data package:

Boca SM, Nishida M, Harris M, Rao S, Cheema AK, Gill K, Seol H, Morgenroth LP, Henricson E, McDonald C, Mah JK, Clemens PR, Hoffman EP, Hathout Y, Madhavan S (2016) Data from: Discovery of metabolic biomarkers for Duchenne Muscular Dystrophy within a natural history study. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.qg6q2
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