Protein sequences of LbNoxA, LbNoxB and LbNoxR in L. bicolor and other different species
Data files
Apr 26, 2024 version files 53.06 KB
Abstract
Ectomycorrhizal symbiosis, which involves mutually beneficial interactions between soil fungi and tree roots, is essential for promoting tree growth. To establish this symbiotic relationship, fungal symbionts must initiate and sustain mutualistic interactions with host plants while avoiding host defence responses. In recent years, the ectomycorrhizal association between the ectomycorrhizal basidiomycete L. bicolor and its host Populus tremula × alba, has been used to elucidate the molecular mechanisms that drive the development of ectomycorrhizal symbiosis. The gene repertoire of L. bicolor contained three Nox genes: LbNoxA (JGI ID Lacbi2|399780), LbNoxB (JGI ID Lacbi2|173015), and LbNoxR (JGI ID Lacbi2|383559). LbNoxA, protein sequence (JGI database + |gene numbers): Clapu1|8615, Sclsc1|12632, Morcra1|822478, Ophsi1|5059, PhlFC14_2|1813626, Pleery1|1506038, Armbor1|1922489, Trave1|68345, Dicsqu463_1|970488, Polbr1|1451927, Ganluc1|486672, Musmu1|NP_031833.3, Lacbi2|399780, LacbiH82_1|443856, Lacbi81306_1|757325, Lacbi55996_1|1021277, LacbiH53_1|522216, LacbiN203_1|820777, LacbiS238N_1|410357, LacbiS238O_1|87145, LacbiCham3_1|66106, LacbiH70_1|500846, Lacbi59489_1|1094392, LacbiH82×H70_1|455396, Lacbi9312_2|1966069, LacbiDR170_1|936588, LacbiD101_1|770957, Lacam2|675282. LbNoxB, protein sequence: Clapu1|2069, Sclsc1|4716, Morcra1|717130, Ophsi1|1953, PhlFC14_2|1930601, Pleery1|1513566, Armbor1|1788315, Trave1|154726, Dicsqu463_1|1002687, Polbr1|1407584, Ganluc1|380884, Musmu1|NP_031833.3, Lacbi2|173015, LacbiH82_1|402315, Lacbi81306_1|388494, Lacbi55996_1|1012552, LacbiN203_1|692258, LacbiS238N_1|466368, LacbiCham3_1|119176, LacbiS238O_1|142990, LacbiH70_1|481432, Lacbi59489_1|1017543, LacbiH82×H70_1|424508, Lacbi9312_2|2376025, LacbiDR170_1|961381, LacbiD101_1|744494, Lacam2|673882, LacbiH53_1|399281. LbNoxR, protein sequence: Clapu1|5169, Sclsc1|101, Morcra1|909770, Ophsi1|2065, PhlFC14_2|1902619, Pleery1|1379754, Armbor1|1887170, Trave1|31426, Dicsqu463_1|961540, Polbr1|1449735, Ganluc1|555878, Musmu1|NP_035007.1, Lacbi2|383559, LacbiH82_1|404736, Lacbi81306_1|796955, Lacbi55996_1|396143, LacbiH53_1|580999, LacbiN203_1|781452, LacbiS238N_1|524632, LacbiS238O_1|142040, LacbiCham3_1|116334, LacbiH70_1|479311, Lacbi59489_1|951497, LacbiDR170_1|1040569, Lacbi9312_2|2114762, Lacam2|671404, LacbiD101_1|660911, LacbiH82×H70_1|470284.
README: phylogenetic tree information
https://doi.org/10.5061/dryad.4mw6m90jr
The protein sequences of LbNoxA, LbNoxB and LbNoxR in L. bicolor and other different species.
Description of the data and file structure
The three files uploaded are the protein sequences of LbNoxA, LbNoxB and LbNoxR in L. bicolor and other different species. LbNoxA, protein sequence (JGI database + |gene numbers): Clapu1|8615, Sclsc1|12632, Morcra1|822478, Ophsi1|5059, PhlFC14_2|1813626, Pleery1|1506038, Armbor1|1922489, Trave1|68345, Dicsqu463_1|970488, Polbr1|1451927, Ganluc1|486672, Musmu1|NP_031833.3, Lacbi2|399780, LacbiH82_1|443856, Lacbi81306_1|757325, Lacbi55996_1|1021277, LacbiH53_1|522216, LacbiN203_1|820777, LacbiS238N_1|410357, LacbiS238O_1|87145, LacbiCham3_1|66106, LacbiH70_1|500846, Lacbi59489_1|1094392, LacbiH82×H70_1|455396, Lacbi9312_2|1966069, LacbiDR170_1|936588, LacbiD101_1|770957, Lacam2|675282. LbNoxB, protein sequence: Clapu1|2069, Sclsc1|4716, Morcra1|717130, Ophsi1|1953, PhlFC14_2|1930601, Pleery1|1513566, Armbor1|1788315, Trave1|154726, Dicsqu463_1|1002687, Polbr1|1407584, Ganluc1|380884, Musmu1|NP_031833.3, Lacbi2|173015, LacbiH82_1|402315, Lacbi81306_1|388494, Lacbi55996_1|1012552, LacbiN203_1|692258, LacbiS238N_1|466368, LacbiCham3_1|119176, LacbiS238O_1|142990, LacbiH70_1|481432, Lacbi59489_1|1017543, LacbiH82×H70_1|424508, Lacbi9312_2|2376025, LacbiDR170_1|961381, LacbiD101_1|744494, Lacam2|673882, LacbiH53_1|399281. LbNoxR, protein sequence: Clapu1|5169, Sclsc1|101, Morcra1|909770, Ophsi1|2065, PhlFC14_2|1902619, Pleery1|1379754, Armbor1|1887170, Trave1|31426, Dicsqu463_1|961540, Polbr1|1449735, Ganluc1|555878, Musmu1|NP_035007.1, Lacbi2|383559, LacbiH82_1|404736, Lacbi81306_1|796955, Lacbi55996_1|396143, LacbiH53_1|580999, LacbiN203_1|781452, LacbiS238N_1|524632, LacbiS238O_1|142040, LacbiCham3_1|116334, LacbiH70_1|479311, Lacbi59489_1|951497, LacbiDR170_1|1040569, Lacbi9312_2|2114762, Lacam2|671404, LacbiD101_1|660911, LacbiH82×H70_1|470284.
Sharing/Access information
Data was derived from the following sources:
JGI MycoCosm database, https://mycocosm.jgi.doe.gov/Lacbi2/Lacbi2.home.html