Data from: Historic land use modifies impacts of climate and isolation in rear edge European beech (Fagus sylvatica L.) populations
Data files
Oct 25, 2024 version files 3.54 MB
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growth_tidy.csv
1.62 MB
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README.md
6.73 KB
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recruits_tidy.csv
161.96 KB
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survival_tidy.csv
1.75 MB
Abstract
Legacies of human land use have the potential to impact demographic responses to climate. However, few studies have investigated the interactive effects of land use legacies and climate change on tree demography. The demographic performance of rear edge populations in particular is an important determinant of a species’ long-term persistence. In this study, we investigated whether human land use legacies affect demographic responses to climate and population isolation in rear edge European beech populations (Fagus sylvatica L.) at the temperate-Mediterranean transition zone in the NE Iberian Peninsula. We utilised data from the Spanish Forest Inventory and generalised linear mixed models to compare the potential interactions across four different demographic rates (tree growth, survival probability, new adult recruitment and sapling recruitment). We found that the demographic rates were affected by the combination of land use legacies, climate and population isolation in different ways, which could potentially lead to complex shifts in future population dynamics under climate change. We identified that intense historic management either magnified negative relationships between tree demography and climate or population isolation, or reduced demographic performance in favourable climates to levels observed in unfavourable climates. Through either form of interaction, we found that intense historic forest management had a negative impact on tree demography, which has the potential to compromise future carbon stocks and long-term population viability. Overall, we show that disentangling human and environmental factors can enable us to better understand heterogeneous demographic performance across the rear edge of species distributions.
https://doi.org/10.5061/dryad.n2z34tn65
Description of the data and file structure
Provides growth, survival and recruitment data for European beech in Catalonia, Spain, alongside predictors relevant to forest demography. Also provides R scripts demonstrating model selection procedure and model outputs.
Files and variables
Details regarding calculation of all variables is detailed in Rhoades et al. (2024).
File: growth_tidy.csv
Description: Data used to fit the growth model in Rhoades et al. (2024).
Variables
- Plot_ID: Anonymised Spanish National Forest Inventory (NFI) plot ID
- IFNcode: Spanish Forest Inventory time period (NFI2-3 or NFI3-4)
- DBH_growth_per_year: Annual tree growth (diameter at breast height, mm)
- LogMod_DBH_growth_per_year: Log modulus transformed annual tree growth (diameter at breast height, mm)
- Growing_Season_No: Number of complete growing seasons between the NFI inventory periods
- dbhini: Tree diameter at breast height (mm) at beginning of inventory period
- dbhini_sc: Tree diameter at breast height (mm) at beginning of inventory period - scaled
- Current_GS_Mean_VPD_Lag2: Mean vapour pressure deficit (kPa) at NFI plot
- Current_GS_Mean_VPD_Lag2_sc: Mean vapour pressure deficit (kPa) at NFI plot - scaled
- GS_VPD_Anomaly_Lag2: Vapour pressure deficit (kPa) anomaly at NFI plot
- GS_VPD_Anomaly_Lag2_sc: Vapour pressure deficit (kPa) anomaly at NFI plot - scaled
- TPI_30m: Topographic position index of NFI plot
- TPI_30m_sc: Topographic position index of NFI plot - scaled
- CWM_P50: Regional drought tolerance index of NFI plot
- CWM_P50_sc:Regional drought tolerance index of NFI plot - scaled
- Fragmentation: Population isolation index of NFI plot
- Fragmentation_sc: Population isolation index of NFI plot - scaled
- Land_Use_1956: Forest age of NFI plot according to land use type in 1956
- Adult_Prop_Resprout: Proportion of adult trees in NFI plot that have resprouted from stumps
- Adult_Prop_Resprout_sc: Proportion of adult trees in NFI plot that have resprouted from stumps - scaled
- Plot_baha_ini: Initial NFI plot basal area at beginning of inventory period (mm/ha)
- Plot_baha_ini_sc: Initial NFI plot basal area at beginning of inventory period (mm/ha) - scaled
- Cut: Recent management of NFI plot
- DTM_Elevation: Elevation of NFI plot, used in the calculation of Topographic Position Index
File: survival_tidy.csv
Description: Data used to fit the survival model in Rhoades et al. (2024).
Variables
- Plot_ID: Anonymised Spanish National Forest Inventory (NFI) plot ID
- IFNcode: Spanish Forest Inventory time period (NFI2-3 or NFI3-4)
- Survival: Tree survival (1 = survival, 0 = mortality)
- Growing_Season_No: Number of complete growing seasons between the NFI inventory periods
- dbhini: Tree diameter at breast height (mm) at beginning of inventory period
- dbhini_sc: Tree diameter at breast height (mm) at beginning of inventory period - scaled
- Current_GS_Mean_VPD_Lag2: Mean vapour pressure deficit (kPa) at NFI plot
- Current_GS_Mean_VPD_Lag2_sc: Mean vapour pressure deficit (kPa) at NFI plot - scaled
- GS_VPD_Anomaly_Lag2: Vapour pressure deficit (kPa) anomaly at NFI plot
- GS_VPD_Anomaly_Lag2_sc: Vapour pressure deficit (kPa) anomaly at NFI plot - scaled
- TPI_30m: Topographic position index of NFI plot
- TPI_30m_sc: Topographic position index of NFI plot - scaled
- CWM_P50: Regional drought tolerance index of NFI plot
- CWM_P50_sc:Regional drought tolerance index of NFI plot - scaled
- Fragmentation: Population isolation index of NFI plot
- Fragmentation_sc: Population isolation index of NFI plot - scaled
- Land_Use_1956: Forest age of NFI plot according to land use type in 1956
- Adult_Prop_Resprout: Proportion of adult trees in NFI plot that have resprouted from stumps
- Adult_Prop_Resprout_sc: Proportion of adult trees in NFI plot that have resprouted from stumps - scaled
- Plot_baha_ini: Initial NFI plot basal area at beginning of inventory period (mm/ha)
- Plot_baha_ini_sc: Initial NFI plot basal area at beginning of inventory period (mm/ha) - scaled
- Cut: Recent management of NFI plot
- DTM_Elevation: Elevation of NFI plot, used in the calculation of Topographic Position Index
File: recruits_tidy.csv
Description: Data used to fit the recruitment (new adult and sapling) models in Rhoades et al. (2024).
Variables
- Plot_ID: Anonymised Spanish National Forest Inventory (NFI) plot ID
- IFNcode: Spanish Forest Inventory time period (NFI2-3 or NFI3-4)
- Ingrowth_Count: Number of new beech adults in NFI plot
- Sapling_Count: Number of beech saplings in NFI plot
- Current_GS_Mean_VPD_Lag2: Mean vapour pressure deficit (kPa) at NFI plot
- Current_GS_Mean_VPD_Lag2_sc: Mean vapour pressure deficit (kPa) at NFI plot - scaled
- GS_VPD_Anomaly_Lag2: Vapour pressure deficit (kPa) anomaly at NFI plot
- GS_VPD_Anomaly_Lag2_sc: Vapour pressure deficit (kPa) anomaly at NFI plot - scaled
- TPI_30m: Topographic position index of NFI plot
- TPI_30m_sc: Topographic position index of NFI plot - scaled
- CWM_P50: Regional drought tolerance index of NFI plot
- CWM_P50_sc: Regional drought tolerance index of NFI plot - scaled
- Fragmentation: Population isolation index of NFI plot
- Fragmentation_sc: Population isolation index of NFI plot - scaled
- Land_Use_1956: Forest age of NFI plot according to land use type in 1956
- Adult_Prop_Resprout: Proportion of adult trees in NFI plot that have resprouted from stumps
- Adult_Prop_Resprout_sc: Proportion of adult trees in NFI plot that have resprouted from stumps - scaled
- Plot_baha_ini: Initial NFI plot basal area at beginning of inventory period (mm/ha)
- Plot_baha_ini_sc: Initial NFI plot basal area at beginning of inventory period (mm/ha) - scaled
- Cut: Recent management of NFI plot
- DTM_Elevation: Elevation of NFI plot, used in the calculation of Topographic Position Index
File: 1_GrowthModel.R
Description: R script showing model selection procedure and final fitted model for tree growth.
File: 2_SurvivalModel.R
Description: R script showing model selection procedure and final fitted model for tree survival.
File: 3_IngrowthModel.R
Description: R script showing model selection procedure and final fitted model for abundance of new adult trees.
File: 4_SaplingModel.R
Description: R script showing model selection procedure and final fitted model for abundance of tree saplings.
The dataset was processed using R and QGIS following the methods described in Rhoades et al. (2024).
