Twenty years of Salix height in response to experimental manipulation of browsing and water table, northern range of Yellowstone National Park
Data files
Sep 25, 2023 version files 4.99 MB
-
beaver_height_data_metadata.pdf
103.96 KB
-
beaver_site_height_data_2015_2019.csv
216.52 KB
-
Bison_count_metadata.pdf
19.03 KB
-
bison_numbers_revised.csv
479 B
-
BisonData2000_2023.csv
2.17 KB
-
browsing_data_2003_2020_2.csv
344.34 KB
-
browsing_data_metadata.pdf
107.52 KB
-
Camera_Master_2012-2015_counts.csv
2.25 MB
-
camera_trap_metadata.pdf
20.20 KB
-
Correct_elk_counts_09_Jul_2023_Park_only_metadata.pdf
18.10 KB
-
corrected_elk_counts_09Jul2023_Park_only.csv
901 B
-
fall_height_data_2001_2020.csv
405.84 KB
-
fall_height_data_metadata.pdf
135.17 KB
-
NR_cougar_density.csv
688 B
-
NR_cougar_density.pdf
17.58 KB
-
Readme.html
625.04 KB
-
README.md
2.45 KB
-
Readme.Rmd
1.36 KB
-
Site_names_and_locations.csv
3.11 KB
-
well_data_2002_2020.csv
672.57 KB
-
Well_data_metadata.pdf
23.30 KB
-
wolf_1995_2022_population_ynp_nr_nnrr_metadata.pdf
16.23 KB
-
wolf_1995_2022_population_ynp_nr_nnrr.csv
449 B
Oct 03, 2023 version files 4.99 MB
-
beaver_height_data_metadata.pdf
103.96 KB
-
beaver_site_height_data_2015_2019.csv
216.52 KB
-
Bison_count_metadata.pdf
19.03 KB
-
bison_numbers_revised.csv
479 B
-
BisonData2000_2023.csv
2.17 KB
-
browsing_data_2003_2020_2.csv
344.34 KB
-
browsing_data_metadata.pdf
107.52 KB
-
Camera_Master_2012-2015_counts.csv
2.25 MB
-
camera_trap_metadata.pdf
20.20 KB
-
Correct_elk_counts_09_Jul_2023_Park_only_metadata.pdf
18.10 KB
-
corrected_elk_counts_09Jul2023_Park_only.csv
901 B
-
fall_height_data_2001_2020.csv
405.84 KB
-
fall_height_data_metadata.pdf
135.17 KB
-
NR_cougar_density.csv
688 B
-
NR_cougar_density.pdf
17.58 KB
-
Readme.html
625.04 KB
-
README.md
2.45 KB
-
Readme.Rmd
1.36 KB
-
Site_names_and_locations.csv
3.11 KB
-
well_data_2002_2020.csv
672.57 KB
-
Well_data_metadata.pdf
23.30 KB
-
wolf_1995_2022_population_ynp_nr_nnrr_metadata.pdf
16.23 KB
-
wolf_1995_2022_population_ynp_nr_nnrr.csv
449 B
Oct 09, 2023 version files 4.99 MB
Abstract
This respository contains multiple datasets collected during a 20 year investigation of the responses of willow (Salix spp.) communities in Yellowstone National Park after the restoration of large carnivores. The study sought to understand whether the restoration of wolves to the food web cause a change in the state of willow communities that occured while wolves were absent. Each dataset has a corresonding file of metadata.
README: Twenty years of Salix height in response to experimental manipulation of browsing and water table, northern range of Yellowstone National Park
Special thanks to the National Science Foundation
Collection of the the data provided in this repository was supported by awards from the National Science Foundation to Colorado State University (DEB 0717367, 1147369, 1655035)
Description of data collection
Experimental and sampling designs as well as descriptions of data collection procedures can be found in:
Hobbs, N. T., D. B. Johnston, K. N. Marshall, E.C. Wolf, and D. J. Cooper. Does restoring apex predators to food webs restore ecosystems? Large carnivores in Yellowstone as a model system. Ecological Monographs. In press.
Description of data files
- fall_height_data_2001_2020.csv contains annual measurements of height of individual willows at the end of the growing season. Metadata are found in fall_height_data_metadata.pdf.
- browsing_data_2003_2020.csv contains annual plant level observations of the number of stems browsed out of a sample of observed stems on individual willow plants during spring. Meta data are found in browsing_data_metadata.pdf
- well_data_2002_2020.csv contains monthly measurements of water table depth during the growing season. Metadata are found in well_metadata.pdf
- bison numbers revised.csv and Bison_data_2003_2020.csv contain annual counts of bison on the northern range. Metadata are found in Bison_count_metadata.pdf
- Camera_Master_2012-2015 contains analysis of images from camera traps. Metadata are found in camera_trap_metadata.pdf
- corrected_elk counts_09Jul2023_Park_only.csv contains sightability corrected counts of elk on the northern range. Metadata are found in corrected_elk counts_09Jul2023_Park_only_metadata.pdf
- NR_cougar_density.csv contains estimates of cougar density on the northern range. Metadata are given in NR_cougar_density.pdf
- wolf_1995_2022_population_ynp_nr_nnrr.csv contains annual counts of wolves on the northern range. Metadata are found in wolf_1995_2022_population_ynp_nr_nnrr_metadata.pdf
- beaver_site_height_data_2015_2019 contains observations of height at beaver-occupied, observational, and experimental sites during fall. beaver_height_data_metadata.pdf contains associated metadata
- Site_names_and_locations.csv gives the names of sites and their locations in utm's
Methods
Sampling and experimental designs and methods used to collect the data were described in
- Hobbs, N. T., D. B. Johnston, K. N. Marshall, E.C. Wolf, and D. J. Cooper. Does restoring apex predators to food webs restore
ecosystems? Large carnivores in Yellowstone as a model system. Ecological Monographs. In press.
Usage notes
The data could be process further with almost any program, but we used R version 4.2.1 (2022-06-23) (R Core Team, 2022. R: A Language and Environment for Statistical Computing. R Foundation forStatistical Computing, Vienna, Austria) and the following packages:
[1] "cowplot" "gridExtra" "bayesplot" "HDInterval"
[5] "MCMCvis" "rjags" "doParallel" "iterators"
[9] "foreach" "dclone" "Matrix" "parallel"
[13] "coda" "forcats" "stringr" "dplyr"
[17] "purrr" "readr" "tidyr" "tibble"
[21] "ggplot2" "tidyverse" "stats" "graphics"
[25] "grDevices" "utils" "datasets" "methods"
[29] "base"
All of these programs are open-source