Strong habitat-specific phenotypic plasticity but no genome-wide differentiation across a rainforest gradient in an African butterfly
Data files
Mar 28, 2023 version files 97.61 MB
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butterfly_denovo_156_99_80_snps.dat2.vcf.gz
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butterfly_denovo_v2.fasta.zip
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Morpho_data_Bicyclus_dorothea.xlsx
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README.md
Abstract
Habitat-specific thermal responses are well documented in various organisms and likely determine the vulnerability of populations to climate change. However, the underlying roles of genetics and plasticity that shape such habitat-specific patterns are rarely investigated together. Here we examined the thermal plasticity of the butterfly Bicyclus dorothea originating from rainforest and ecotone habitats in Cameroon under common garden conditions. We also sampled wild-caught butterflies from forest and ecotone sites and used RADseq to explore genome-wide population differentiation. We found differences in the level of phenotypic plasticity across habitats. Specifically, ecotone populations exhibited greater sensitivity in wing eyespot features with variable development temperatures relative to rainforest populations. Known adaptive roles of wing eyespots in Bicyclus species suggest that this morphological plasticity is likely under divergent selection across environmental gradients. However, we found no distinct population structure of genome-wide variation between habitats, suggesting high levels of ongoing gene flow between habitats is homogenizing most parts of the genome.
Methods
RADseq data was collected and processed using methods described in the paper. Files include:
1. fasta sequences of de novo assembled RAD loci
2. genotype information of the 156 good quality samples, with posterior cutoff of 0.99 and minimum sample cutoff of 0.8
3. morphological data: each row represents a single individual butterfly belonging to a given site and habitat. For each individual, we collected the following morphological characteristics on the fore and hindwing (values are in mm). Temperatures are in the Celsius scale (°C).
LFW = Length of the forewing; LHW = length of the hindwing; WHW = width of the hindwing; WFW = width of the forewing; E1FW = diameter of the first eyespot forewing; E2FW = diameter of the second eyespot forewing; E1HW = diameter of the first eyespot hindwing; E2HW = diameter of the second eyespot hindwing; E3HW = diameter of the third eyespot hindwing; E4HW = diameter of the fourth eyespot hindwing; E5HW = diameter of the fifth eyespot hindwing; E6HW = diameter of the sixth eyespot hindwing; E7HW = diameter of the seventh eyespot hindwing.