Data from: preserved appendages in a Silurian binodicope: implications for the evolutionary history of ostracod crustaceans
Data files
Mar 29, 2024 version files 350.60 MB
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Model.zip
111.99 MB
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README.md
1.58 KB
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TomogramsA.zip
222.66 MB
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TomogramsB.zip
15.95 MB
Abstract
Derima paparme gen. et sp. nov. from the Herefordshire Silurian Lagerstätte is one of only a handful of exceptionally preserved ostracod crustaceans known from the Palaeozoic. A male specimen provides the first evidence of the soft-part morphology of Binodicopina, a major group of Palaeozoic ostracods comprising some 135 Ordovician to Permian genera. The appendage morphology of D. paparme, but not its shell, indicates that binodicopes belong to Podocopa. The discovery that the soft-part morphology of binodicopes allies them with podocopes affirms that using the shell alone is an unreliable basis for classifying certain fossil ostracods and that knowledge of soft-part morphology is critical for the task. Current assignment of many fossil ostracods to higher taxa may require reconsideration.
README: Preserved appendages in a Silurian binodicope: implications for the evolutionary history of ostracod crustaceans
https://doi.org/10.5061/dryad.9zw3r22p2
Serial-grinding tomography dataset and 3D model for holotype of Derima paparme (Euarthropoda, Ostracoda) from the Silurian of Herefordshire, UK.
The specimen is accessioned in the Oxford University Museum of Natural History, OUMNH PAL-C.36094.
Description of the data and file structure
Overview
Data comprises:
(a) RGB images in bmp format representing tomographic datasets from 20-micron interval manual serial grinding. These have been registered and cropped to ROI. There are two parts, representing part and counterpart of the original specimen. All images are 450 pixels-per-mm. Part A has B
(b) Mesh-models constructed from RGB images using the SPIERS software package, http://spiers-software.org. These are in VAXML format (see also http://spiers-software.org) - they can be viewed using the SPIERsview element of the SPIERS software suite, or the STL files that comprise the model can be imported into any other mesh software.
Directory structure
The archive contains three zip achives.
'Model.zip' archive comprises:
· one vaxml metadata file
· one directory containing STL files describing morphology
'TomogramsA.zip' archives comprises 87 BMP image files (J009.bmp - J095.bmp).
'TomogramsB.zip' archives comprises 11 BMP image files (H005.bmp - H015.bmp).
Methods
Colour images obtained through digital microscope photography and serial grinding of specimen OUMNH PAL-C.36094, at 20 micron intervals. The method is detailed in Sutton et al. (2014). Images have been registered, but not processed in any other way. There are two datasets, representing the part and counterpart.
3D Model is presented as a VAXML/STL model, manually prepared from the image data using the SPIERS software suite, following the method of Sutton et al. (2014).
Sutton, MD, Rahman, I, Garwood, RJ. 2014. Techniques for Virtual Palaeontology. Wiley, 218pp.