Loss of biodiversity is accelerating, including the loss of genetic diversity. Conservation of small, isolated populations may be important, as they can provide valuable contributions to overall genetic variation and long-term viability of species. Furthermore, such populations may play an essential role in adaptation to new environments following changes in e.g. land-use and climate. Dracocephalum ruyschiana is a threatened plant species throughout its European distribution, but 25% of the European populations are situated within Norway. Therefore, the species has its own action plan in Norway, which includes demographic monitoring. However, this monitoring does not cover genetic variation nor is the selection of monitored populations based on genetic differentiation, therefore this fundamental level of biodiversity is overlooked. We analyzed 43 sites using 96 SNPs developed for D. ruyschiana, to investigate whether the monitored populations cover the genetic variation and differentiation found within the Norwegian distribution. The results show structuring and differentiation between populations and indicate that there are at least four distinct genetic groups, of which only two are covered extensively by current demographic monitoring. We suggest that two sites representing the two other genetic groups should be included in the national monitoring program to better conserve the genetic variation found in the Norwegian population of D. ruyschiana. Overall, our results highlight the importance of an integrated, interdisciplinary framework to better monitor and conserve biodiversity at several levels.

Genomic DNA was extracted from the silica dried leaves of D. ruyschiana sampled from 43 sites across the Norwegian distribution range. All samples were genotyped at 96 presumably non-coding SNPs applying a SNP-typing assay recently developed specifcally for the purpose of facilitating monitoring of the northern dragonhead (see Kleven et al. 2019 for details). Briefy, SNPs were genotyped on a 96.96 Dynamic Array using the Fluidigm EP1 instrument according to the manufacturer’s protocol and scored using the Fluidigm SNP genotyping analysis software (https:// www.fuidigm.com/software).

Please see metadata in the README file for additional details on the dataset.

Dracocephalum ruyschiana is an endangered species in Norway and Europe. The datafile contains geo references, but with lower accuracy then available from other sources, e.g. Norwegian Biodiversity Information Centre. Thus, geo refrences in the dataset should not impact conservation efforts or introduce unintended risk to the species.